Clarity Equine Nutrition

Clarity Equine Nutrition Dr. Clair Thunes takes the guesswork out of creating a balanced diet that optimizes your horseโ€™s health and gives you peace of mind with every meal.

She is also available to veterinarians, supplement and feed companies and for educational engagements. Clarity Equine Nutrition is an equine nutrition consulting company owned and operated by Dr. Clair Thunes PhD. Based in Gilbert Arizona Clarity has clients across North America from back yard ponies to US team members.

Feeding horses is expensive and inefficiencies in feeding systems quietly add to those costs.  In our newest episode of ...
12/22/2025

Feeding horses is expensive and inefficiencies in feeding systems quietly add to those costs. In our newest episode of Scoop & Scale, weโ€™re joined by Dr. Krishona Martinson (University of Minnesota) to discuss published research on hay waste in horses, what drives it, and how feeding method choices can significantly impact both forage utilization and overall feeding costs.

This conversation focuses on practical, research-based strategies horse owners and barn managers can apply immediately to reduce waste, improve efficiency, and make more informed decisions around forage management.

๐Ÿ‘‰Listen now by clicking the link below or on your favorite podcast app

https://www.facebook.com/share/p/14MMMASu6ez/

Dec 22, 2025 | Dr. Clair Thunes, Dr. Krishona Martinson, Equine Nutrition, Forage, Hay, Hay Nets, Hay Waste, Podcast, Round Bale Feeder

We love seeing the American Association of Equine Practitioners drawing attention to the importance of trace minerals in...
12/19/2025

We love seeing the American Association of Equine Practitioners drawing attention to the importance of trace minerals in the equine diet. As their post highlights, trace minerals play a vital role in overall health, performance, and long-term soundness.

Whatโ€™s important to understand, though, is how those needs are best met.

When a horseโ€™s forage is properly evaluated and the diet is correctly balanced with a fortified feed or a well-formulated ration balancer, additional trace mineral supplementation is typically unnecessary.

Many standalone trace mineral supplements, even those produced by reputable companies, simply donโ€™t provide meaningful levels of fortification. The same applies to mineral blocks. These products only work if consumed in sufficient quantities every single day, which rarely happens. And even when a horse consumes enough to meet daily sodium needs, the concentration of trace minerals is often so low that they contribute little to overall requirements.

This is why diet evaluation matters. Trace mineral adequacy isnโ€™t about adding more products, itโ€™s about ensuring the base diet is correctly balanced.

If youโ€™d like help evaluating your horseโ€™s forage and feeding program, consultations can be scheduled through our website.

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Hay waste adds up fastโ€ฆ and this question sparks a lot of discussion ๐Ÿ‘€Jump over to the Scoop and Scale podcast page to v...
12/16/2025

Hay waste adds up fastโ€ฆ and this question sparks a lot of discussion ๐Ÿ‘€

Jump over to the Scoop and Scale podcast page to vote in their pop quiz about hay waste and definitely catch next weekโ€™s episode with Dr. Krishona Martinson who did the research hay waste.
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โญ๏ธ POP QUIZ: Hay Waste & Round Bale Feeders โญ๏ธ

Based on published research, what percentage of hay do you think is wasted when horses are fed round bales with NO feeder?

๐Ÿ‘‡ Cast your vote in the poll below ๐Ÿ‘‡
(No Googlingโ€ฆ weโ€™ll talk about the answer soon ๐Ÿ˜‰)

Hay waste is one of the biggest costs in horse ownership, especially during times when hay prices are high. Research has shown that feeder design (or lack of one) has a huge impact on how much hay actually ends up in your horse versus in the mud, manure, or bedding.

๐Ÿ’ก Join us next week on the Scoop and Scale podcast when the author of this study, Dr. Krishona Martinson (University of Minnesota), joins us to break it down.

This is one of those topics where the data might surprise you. ๐Ÿคฏ

๐Ÿ“Š Vote now and then tune in next week to see how close you were.

A. 10โ€“20%
B. 25โ€“35%
C. 40โ€“50%
D. Over 50%

๐Ÿ†•New Podcast EpisodeExcited to share our latest episode of Scoop and Scale. Fat is one of the most misunderstood areas o...
12/08/2025

๐Ÿ†•New Podcast Episode

Excited to share our latest episode of Scoop and Scale. Fat is one of the most misunderstood areas of equine nutrition, and this conversation breaks down the science in a way horse owners can actually apply. If youโ€™ve ever wondered which fat source is best and why, this is a great place to start.

Listen here ๐Ÿ‘‰https://podcasts.apple.com/kh/podcast/ep-64-feeding-fat-to-horses-different-types-and-what-to-know/id1722362615?i=1000740217653


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๐ŸŽ™๏ธNew Episode Just Dropped

Ep. 64: Feeding Fat to Horses: Different Types and What to Know

Fat is one of the most misunderstood parts of a horseโ€™s diet, yet it can be a powerful tool for weight gain, health, and performance. In this episode, we break down the most common fat sources for horses, how they differ, and when you should (or shouldnโ€™t) use them. From rice bran and flax to oils, seeds, and supplements, we cut through the confusion so you can make informed feeding decisions.

Youโ€™ll learn:
-The fundamental differences between different kinds of fat
-How omega-3 and omega-6 fats impact health and inflammation
-Which fat sources offer the best balance
-Pros and cons of rice bran, flax, chia, canola, coconut, h**p, and more
-Why some horses benefit from EPA/DHA sources like fish oil
-How to choose the right fat based on your horseโ€™s needs

A clear, practical guide to feeding fat the right way. Letโ€™s dive in!

๐Ÿ‘‰Listen here https://podcasts.apple.com/us/podcast/ep-64-feeding-fat-to-horses-different-types-and-what-to-know/id1722362615?i=1000740217653

12/02/2025

It's Giving Tuesday. What are you favorite equine non-profit organizations? Ours include Brooke USA, The United States Pony Clubs Inc., (USPC) Official Page, and Colorado Horse Rescue Network. Tag yours in the comments.

Send a message to learn more

11/25/2025

An excellent summary of what we can expect this next week from the EHV-1 outbreak. If we can stay the course this can be over quickly.

New episode alert! ๐ŸŽ™๏ธ๐ŸดWe meant to keep it shortโ€ฆ but once we start talking horses, time becomes a suggestion.Amid EHV-1 ...
11/24/2025

New episode alert! ๐ŸŽ™๏ธ๐Ÿด

We meant to keep it shortโ€ฆ but once we start talking horses, time becomes a suggestion.

Amid EHV-1 worries and holiday stress, this Favorite Things episode brings a mix of helpful products, conversations, and a few laughs.

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Nov 24, 2025 | Dr. Clair Thunes, Equine Nutrition, Flexineb, Gifts For Horse Lovers, Horse Fly Sheet, Horse Grooming, Podcast, Tack Cleaning

A super summary of the data we have regarding feeding extra lysine when facing EHV-1. This literature search shows, we r...
11/22/2025

A super summary of the data we have regarding feeding extra lysine when facing EHV-1. This literature search shows, we really donโ€™t have conclusive data to support it. As I said earlier this week and Dr De Boer reiterates here, the best thing you can do nutritionally for your horse it to feed a properly balanced diet that meets all needs while practicing solid biosecurity.

๐‡๐ž๐ซ๐ฉ๐ž๐ฌ๐ฏ๐ข๐ซ๐ฎ๐ฌ & ๐‹๐ฒ๐ฌ๐ข๐ง๐ž: ๐–๐ก๐š๐ญ ๐ญ๐ก๐ž ๐‘๐ž๐ฌ๐ž๐š๐ซ๐œ๐ก ๐’๐š๐ฒ๐ฌ

Thereโ€™s some chatter in the equine world right now thatโ€™s created just enough chaos to wake me up from my fall hiatus. And unless youโ€™ve been living under a rock, you probably know exactly what Iโ€™m talking about โ€“ the equine herpesvirus outbreak in the U.S. and Canada.

Thereโ€™s already a ton of solid info out there about the virus, the strains, what to watch for, and the biosecurity steps everyone should be taking. So thatโ€™s not why I am here. What I want to talk about are some of the claims floating around about (you guessed it) lysine.

As soon as the outbreak popped up on my feed, I immediately saw tips to help protect your horse against the virus, but one in particular jumped out: supplemental lysine. I knew right away that I wanted to investigate it further to see if there was any truth to these claims. So I went down the rabbit hole of research, and here is what I found!

๐–๐ก๐š๐ญ ๐ข๐ฌ ๐ฅ๐ฒ๐ฌ๐ข๐ง๐ž ๐š๐ง๐ ๐ฐ๐ก๐ฒ ๐๐จ๐ž๐ฌ ๐ข๐ญ ๐ฆ๐š๐ญ๐ญ๐ž๐ซ?
Lysine is an essential amino acid for horses and a fundamental building block of protein. So how does this connect to herpesvirus? In humans and cats, early studies suggested that herpesviruses require arginine, another amino acid, to replicate. Some researchers proposed that lysine might interfere with arginine availability, which led to the idea that feeding extra lysine could outcompete arginine and reduce viral replication or shedding to ultimately reduce the severity or recurrence of the disease.

๐–๐ก๐š๐ญ ๐๐จ๐ž๐ฌ ๐ญ๐ก๐ž ๐ซ๐ž๐ฌ๐ž๐š๐ซ๐œ๐ก ๐ฌ๐š๐ฒ?
This is where it gets interesting.

The research on this topic has primarily taken place in humans and cats. So letโ€™s take a deeper dive into what's out there!

๐‘ฌ๐’‚๐’“๐’๐’š ๐‘ฐ๐’ ๐’—๐’Š๐’•๐’“๐’ (๐‘ช๐’†๐’๐’ ๐‘ช๐’–๐’๐’•๐’–๐’“๐’†) ๐‘พ๐’๐’“๐’Œ
It all began in 1960โ€™s with an in vitro study by Tankersley (1964) evaluating human herpesvirus 1 (HHV-1/HSV-1) in cell culture. This study found that this virus required arginine for replication in cell culture while lysine was not required. By the 1980โ€™s, Griffith et al. (1981) reported similar findings and suggested that lysine could potentially inhibit HSV-1 replication in specific cell culture conditions. By the 1990โ€™s, this research had expanded into the veterinary field.

๐‘ช๐’๐’Š๐’๐’Š๐’„๐’‚๐’ ๐‘ป๐’“๐’Š๐’‚๐’๐’”
The first feline clinical study evaluating feline herpesvirus 1 (FHV-1) was in 2002 by Stiles et al., using only eight cats fed 500 mg of lysine. Those cats had higher plasma lysine and slightly less severe conjunctivitis, but no difference in viral shedding and their plasma arginine levels didnโ€™t change.

The next study (Maggs et al., 2003) used 14 cats and found lysine supplementation (400 mg) resulted in elevations in plasma lysine but no change in plasma arginine levels. While clinical signs did not differ across treatment geoups, the authors found that the lysine-treated group had reduced viral shedding.

In 2007, the research became more robust as Maggs et al. used 50 cats with FHV-1 and fed half 51 g lysine per kg diet (lysine) and the other half a diet of 11 g lysine per kg diet (control). While the lysine supplemented cats had higher plasma lysine and lower plasma arginine, they also had greater disease severity than the control group.

Another study (Rees et al., 2008) looked at 291 cats from the day they were brought into the shelter until they were adopted. Cats were randomly assigned to a lysine (250 or 500 mg based on size) or control group. In this study, 37% of lysine cats developed clinical signs compared to 34% of cats in the control group. These authors also highlighted the importance of stress reduction and proper sanitation to reduce illness in cats which they believed would be a better use of money and resources than lysine supplementation.

In 2009, Drazenovich et al. used 261 cats which were fed either a control diet (17 g lysine/kg food) or a lysine-enriched diet (57 g lysine/kg food). While plasma lysine was higher in the lysine group, these cats were also more likely to develop moderate to severe signs of the disease and test positive when compared to the control group.

Based on these studies, lysine consistently increased plasma lysine but did not reliably change plasma arginine, did not consistently reduce viral shedding, and, in a surprising turn of events, two of these clinical trials even suggested that providing supplemental lysine in the diet could make the clinical signs of FHV-1 worse. As research on this topic has continued to unfold, limitations and potential sources of bias in the earlier studies have become more apparent. While some of the smaller trials showed promising results, those findings couldnโ€™t be replicated in larger, more controlled studies, which really challenges the original claims. Most recent reviews conclude that there is no reliable evidence to support lysine supplementation as a management tool for herpesvirus.

๐‘ฏ๐’๐’“๐’”๐’† ๐‘น๐’†๐’”๐’†๐’‚๐’“๐’„๐’‰?
To my knowledge (and I dug hard), there is ZERO research that has been completed in horses to evaluate the impact of lysine on equine herpesvirus. Recommendations floating around are based almost entirely on early human HSV studies and later cat FHV-1 studies, many of which have since been challenged or contradicted.

Even though EHV and FHV are both alphaherpesviruses, they behave very differently in their respective hosts. EHV can cause severe respiratory disease, abortions, neonatal foal death, and neurological disease (EHM). None of these manifestations have ever been studied in relation to lysine. Horses also have entirely different digestive systems, amino acid metabolism, and dietary requirements than the species these studies were based on. So even if lysine showed positive effects elsewhere, there is no reason to assume those results would apply to horses or to equine-specific herpesviruses.

๐’๐จ ๐ฐ๐ก๐ž๐ซ๐ž ๐๐จ ๐ฐ๐ž ๐ ๐จ ๐Ÿ๐ซ๐จ๐ฆ ๐ก๐ž๐ซ๐ž?
This situation is stressful and scary, and it's natural to want to do everything in our power to protect our horses. And if I am being honest, I am a bit disappointed that many supplement and feed companies are using this outbreak as a marketing strategy. In reality, if your horse is eating a quality, balanced feed at or above the recommended levels, their lysine requirements are almost certainly being met - which is what truly matters.

Rather than reaching for extra lysine, focus on what genuinely supports your horseโ€™s health: a balanced diet. Many horses I evaluate are deficient in key nutrients like copper, zinc, vitamins A and E, and selenium. Ensuring overall nutrient balance will always do more for your horse than supplementing one unproven ingredient.

But most importantly, utilize proper biosecurity measures and work closely with your veterinarian if there are any concerns. Remember, an ounce of prevention is worth more than a pound of a cure!

Stay safe and healthy, everyone!

Cheers!
Dr. DeBoer
(a Ph.D., not a vet)

Tankersley Jr RW. Amino acid requirements of herpes simplex virus in human cells. Journal of bacteriology. 1964 Mar;87(3):609-13.

Griffith RS, DeLong DC, Nelson JD. Relation of arginine-lysine antagonism to herpes simplex growth in tissue culture. Chemotherapy. 1981 Sep 8;27(3):209-13.

Stiles J, Townsend WM, Rogers QR, Krohne SG. Effect of oral administration of L-lysine on conjunctivitis caused by feline herpesvirus in cats. American Journal of Veterinary Research. 2002 Jan 1;63(1):99-103.

Maggs DJ, Nasisse MP, Kass PH. Efficacy of oral supplementation with L-lysine in cats latently infected with feline herpesvirus. American Journal of Veterinary Research. 2003 Jan 1;64(1):37-42.

Maggs DJ, Sykes JE, Clarke HE, Yoo SH, Kass PH, Lappin MR, Rogers QR, Waldron MK, Fascetti AJ. Effects of dietary lysine supplementation in cats with enzootic upper respiratory disease. Journal of Feline Medicine and Surgery. 2007 Apr;9(2):97-108.

Rees TM, Lubinski JL. Oral supplementation with L-lysine did not prevent upper respiratory infection in a shelter population of cats. Journal of Feline Medicine and Surgery. 2008 Oct;10(5):510-3.

Drazenovich TL, Fascetti AJ, Westermeyer HD, Sykes JE, Bannasch MJ, Kass PH, Hurley KF, Maggs DJ. Effects of dietary lysine supplementation on upper respiratory and ocular disease and detection of infectious organisms in cats within an animal shelter. American journal of veterinary research. 2009 Nov 1;70(11):1391-400.

11/21/2025

A quick PSA addressing feeding high levels of lysine as a precaution to EHV1.

This will be a great resource of factual information as the EHV outbreak evolves.
11/20/2025

This will be a great resource of factual information as the EHV outbreak evolves.

The Equine Disease Communication Center is monitoring an outbreak of EHM that originated at the Womenโ€™s Professional Rodeo Association (WPRA) World Finals and Elite Barrel Race event Nov 5-9. To date, officially confirmed cases have been reported in the following states-

11/20/2025

In light of the current EHV-1/EHM outbreak I wanted to share this excellent post from my friend Ali who knows better than many the realities of dealing with this disease. A little known fact about me is that I used to work in epidemiology specifically modelling infectious animal diseases. Good biosecurity protocols are crucial not just during an outbreak but all the time because horses are often contagious before they are diagnosed. What biosecurity measures are you practicing both in your barn and when on the road? ~ Dr Clair

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Excellent information summarizing the research on hand versus power dental floats from Dartmouth's personal dental profe...
11/18/2025

Excellent information summarizing the research on hand versus power dental floats from Dartmouth's personal dental professional.

Hand Files vs. Power Tools for Equine Dentistry โ€” What Research Says

This is one of those topics that divides horse people, but the science behind it is actually pretty straightforward. Both methods can be safe and effective โ€” it all comes down to training and technique, not the tool itself.

Below is a summary of what veterinary research, dental associations, and equine hospitals say, with sources you can cite.

โœ… Power Dentistry (Motorized Tools)

What the research says:

1. Power tools allow more precision and less fatigue.

According to the American Association of Equine Practitioners (AAEP), motorized dental equipment gives veterinarians greater control, improved visibility, and a smoother finish โ€” especially when correcting major issues.
Source: AAEP Dental Care Guidelines, 2019
https://aaep.org/sites/default/files/Guidelines/DentalGuidelines.pdf

2. The risk of soft-tissue injury is lower with proper training.

Equine Veterinary Education (EVE) published studies showing that power tools do not burn or damage teeth or soft tissue when used correctly, and the risk of cutting the tongue/cheeks is actually higher with sharp hand rasps.
Source: Easley et al., EVE, 2005; 2008.

3. Heat damage is not an issue when used properly.

Studies show that tooth temperature remains in the safe range as long as the operator uses short passes and proper water cooling.
Source: Dixon & Dacre, Equine Dental Pathology, 2005 (Wiley-Blackwell).

4. More accurate correction of sharp points, hooks, and wave mouth.

Colorado State Universityโ€™s Equine Dentistry Program states that motorized tools allow more even balancing and better molar arcades.
Source: CSU Veterinary Teaching Hospital โ€“ Equine Dentistry.

โœ… Hand Floating (Manual Files/Rasps)

What the research says:

1. Lower learning curve for minor work.

Hand tools can be effective for routine smoothing of sharp points and mild dental maintenance.
Source: Ramey, Equine Dentistry: A Practical Guide, 2004.

2. Higher risk of soft-tissue cuts in the wrong hands.

The AAEP warns that unguarded rasps can easily cut cheeks, gums, or the tongue if the horse moves suddenly.
Source: AAEP Dental Care Guidelines, 2019.

3. Limited ability to correct significant dental problems.

Manual tools cannot correct severe hooks, tall ramps, wave mouth, shear mouth, or caudal hooks with the same precision.
Source: Dixon & Dacre, Equine Dental Pathology, 2005.

4. Fatigue reduces accuracy.

Research shows that hand rasping leads to operator fatigue, which increases the chance of uneven reduction and accidental abrasion of soft tissue.
Source: Equine Veterinary Journal (EVJ), 1999; 2003.

So which is better?

According to the AAEP and veterinary dental specialists:

โ€œThe safety and effectiveness of equine dental procedures depend more on the training, skill, and experience of the practitioner than on the type of instrument used.โ€
โ€” AAEP Dental Guidelines (2019)

Both methods work โ€” but power tools give better accuracy, are safer for soft tissue, and reduce operator fatigue when used by a trained veterinarian.

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Tuesday 8am - 5pm
Wednesday 8am - 5pm
Thursday 8am - 5pm
Friday 8am - 5pm

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