PathoSense

We offer a complete sample-collection-to-diagnostic intepretation platform for infectious diseases i

08/08/2025

Learn more about microbiome studies

Long-read sequencing enables sequencing the full-length 16S rRNA gene. This has major advantages because we can then analyse all the variable regions present in this gene and this information can then be used to identify bacterial taxa up to genus & species level.
This is a major advantage because it deepens the taxonomic resolution of microbiome studies!

Learn more about the fundamentals of microbiome studies in our free "Back to work microbiome refresher" webinar!

Subscribe below 👇🏽

07/08/2025

🔬🌍 The Journey of the Microbiome continues!

🔎 In PART 1, we showed how incoming samples are processed in the lab. As the journey continues, this second part presents the next steps in the analysis process: DNA sequencing, data analysis and reporting!

Get deeper insights into effectively interpreting a microbiome report during our upcoming "Back-to-work microbiome refresher webinar" on September 11th.
Subscribe here: https://hubs.la/Q03xsYqh0

🦠 Ready to plan your next microbiome study? Contact us for comprehensive guidance from sample collection to DNA interpretation.

05/08/2025

🧊 Sample storage for microbiome studies

It all starts when you collect the samples in the barn or at the side of the animal. Samples should be cooled to 4°C immediately and then be transfered to a freezer (-20°C short term or -80°C long term) to stabilize the microbiome most effectively.

Learn more about the fundamentals of microbiome studies in our free "Back to work microbiome refresher" webinar!

31/07/2025

🔬🌍 Discover the Journey of the Microbiome!

Always wondered how samples for microbiome analysis are processed in the lab? Step inside the world of microbiome research during this behind-the-scenes look at the different processing steps 🚀🧬

These steps will be explained more in depth during our upcoming "Back-to-work microbiome refresher webinar" on September 11th. Register here for the webinar: https://hubs.ly/Q03xsPlp0

30/07/2025

Proper study setup and sample collection form the basis of microbiome studies.

Willing to learn how to do it properly?

Discover everything in our free webinar on the 11th of September!

17/07/2025

We know many of you are enjoying well-deserved summer holidays ☀️, but here's something exciting to look forward to when you're back at your desk!
Our incredibly popular "Back-to-work microbiome refresher webinar" is returning for its 4th edition this September, and it's the perfect way to dive back into learning. Designed specifically for experts in the animal nutrition and feed industry, this live online session is your golden ticket to refreshing or enhancing your understanding of microbiome studies.

What you'll uncover (from the comfort of your post-holiday office!):
✔️ The essential ins and outs of conducting successful microbiome studies.
✔️ Clear explanations on the differences between 16S rRNA gene sequencing and shotgun metagenomics.
✔️ Practical skills to confidently interpret and analyze typical microbiome study reports – from rarefaction plots to alpha and beta diversity!

Mark your calenders and secure your spot for a productive return to work: https://hubs.la/Q03xq_H70

14/07/2025

Let's give a big welcome to our student, Marie!

Marie, who is currently studying veterinary sciences and just finished her 3rd bachelor, reached out to us a few months ago with a keen interest in lab work. We were so impressed with her initiative that we brought her on board, and we're so glad we did!

In just a short time, Marie has already mastered the art of swab production and logistics, earning her the well-deserved title of 'Swab Master'! She has also taken her first steps in the lab and assists with marketing tasks.

We love her energy and can-do attitude. So happy you're part of the team, Marie!

08/07/2025

PathoSense continues to accept sample submissions during the holidays. Just a heads up, please note that PathoSense will be closed on the official holidays of 21 July and 15 August.

If you want to get in touch about WGS, microbiome and other services feel free to send us an email.

Enjoy you the Summer! 🌞

07/07/2025

Welcome to the team, Sofie!
We're excited to introduce our new Lab Technician.

As our company continues to grow, Sofie will be assisting Dries and Manon in the laboratory. As you can see, Sofie is already busy in the lab being onboarded by Manon! Her role is crucial to guaranteeing the high-quality handling of all samples and maintaining our commitment to efficient turnaround times.

Sofie is a veterinarian with additional training in biotechnology, bringing a fantastic blend of life sciences knowledge and applied research skills.

Welcome, Sofie! Happy to have you with us.

01/07/2025

Great workshop about diagnostics in swine organised by our German partner laboratory San Vet. The German swine vets were immersed in different aspects of diagnostics from PCR, to microbiology and pathology to sequencing.

Sebastiaan and Adelaide had the pleasure to present the PathoSense sequencing-based diagnostic tool. They spoke about general applications to expand diagnostics of PRDC and enteric diseases. Furthermore, we showed how PRRSV whole genome sequencing can aid in strain surveillance. Finally, we prepared already for our new assay that is coming... virulence factor detection!

Thanks for the very kind receipt at the impressive San Group Biotech Campus!

-marijke buch

Traveling continues now... more news to come later this week :-)

26/06/2025

At PathoSense, we are your partners in viral characterisation.
We provide expert Viral Whole Genome Sequencing (WGS) services for a diverse range of species, receiving samples from all over Europe.
Whether you're tracking viral evolution in livestock or investigating pathogens in companion animals, our dedicated team is here to help. As a certified service provider of Oxford Nanopore Technologies, with deep expertise, we deliver fast, reliable results that provide clear answers to your most complex questions.
Look through the images to see the scope of our viral WGS work and how we can support your project.

Ask your question here: Link in first comment 👇

11/06/2025

🔬 Excited to share our latest research contribution on an emerging pathogen threat in exotic reptiles.

PathoSense co-authored a study investigating a severe disease outbreak in imported juvenile caiman lizards

Key findings:

- Ferlavirus was identified as primary cause of respiratory and systemic disease. Sequencing indicated close relatedness with ferlaviruses from anacondas.
- Novel barthadenovirus and Cryptosporidium avium co-infections detected
- International pet trade highlighted as pathway for pathogen spread

This case demonstrates how comprehensive diagnostic approaches can uncover complex co-infections affecting exotic species. The identification of ferlaviruses in lizards adds to growing evidence of their broader host range beyond snakes.

Great work by Rachel Marschang, Camille Francois and all co-authors!

The link to the journal website can be found in the comments ↓

Adres

Merelbeke

Website

https://www.pathosense.com/, https://linktr.ee/pathosense

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