Laboratory of Molecular & Conservation Genetics, GVISH, Amravati

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Our recently published article entitled “MOLECULAR PHYLOGENY OF A RODENT FROM MELGHAT TIGER RESERVE IN CENTRAL INDIA: A ...
17/07/2020

Our recently published article entitled “MOLECULAR PHYLOGENY OF A RODENT FROM MELGHAT TIGER RESERVE IN CENTRAL INDIA: A PROBABLE NEW SPECIES OR NEW GENUS” came out from the Laboratory of Molecular & Conservation Genetics (LMCG), GVISH, Amravati. This study resolves the phylogeny of enigmatic road-kill rodent from the Melghat Tiger Reserve, Amravati, in central India. In this study, we sequenced one nuclear (IRBP) and a mitochondrial gene (Cytochrome b) gene. We used robust and widely used Bayesian Clustering method to investigate the genetic affinities of this rodent with others. The Bayesian Inferred (BI) phylogenetic trees revealed it to be a murid, showing genetic affinities to the genus Millardia by clustering with M. kathleenae and M. meltada in a monophyletic clade. But the genetic distance estimation for both mitochondrial and nuclear genes also exhibited significant differences with the known Millardia species. Thus, the possibility of a new species of genus Millardia, or even a new genus in the family Muridae in the unexplored region of Central India cannot be ruled out.

16/05/2020

International E-Conference on "Strategies and Challenges in Higher Education during COVID-19 Lockdown Period in India with reference to World" Organized By G...

11/12/2018

Dr. Mumtaz Baig, Associate Professor in the Department of Zoology and Group Leader, Laboratory of Molecular and Conservation Genetics, GVISH, Amravati, in association with Professor Jeremy Searle of prestigious 14th ranked Cornell University; the USA in the world deciphered the origin of black rat. This breakthrough research has been published in prestigious journal, Biological Invasion published by Nature-Springer. The duo compared the DNA of black rats from India, Eurasia, Americas, and Australia and provided genetic evidence in support of dispersal of the black rat “Out of India”. Through DNA, the researcher shows how black rat moved out of India by ship routes from ancient Indus valley, to Arabian Peninsula and to Europe and to Americas. The research is of great significance for the bio-medical, archeological and genetic fields. Director of the Institute Dr. S. G. Gupta lauded the efforts of Dr. Baig and co-researchers.

03/10/2018
One more publication from LMCG. Heartily congratulations to the Group Leader, Dr. Mumtaz Baig and Dr. Jeremy Searle...Or...
22/09/2018

One more publication from LMCG. Heartily congratulations to the Group Leader, Dr. Mumtaz Baig and Dr. Jeremy Searle...
Origin of the unwelcome companion, black rat (Rattus rattus) debunked:
Our recent groundbreaking study just published in the prestigious journal Biological Invasion (Springer-Nature) as a part of Dr. Mumtaz Baig's postdoctoral stint at Cornell University USA. This study deals with the black rat, world's number one invasive species. Earlier genetic and paleontological study provides evidence that black rat also called as house rat originated in India and get dispersed to all major continents such as Europe, Arabian Peninsula, Africa, Americas and Australia via Sea route. But how and when rats started living with human and how they evolved was not known. In this first-ever phylogeographic study, we collected samples of house rat from 18 localities and sequenced two mitochondrial loci namely Cytb and D-loop and compared them with entire available sequences in the GenBank. Our study provides interesting findings such as (i) black rat living along the East coast and in Gangetic region are the ancestral population (ii) tendency of commensalism (living with the human) originated for the first time in rat inhabiting north-west of the Indian subcontinent which in our analyses point towards Indus Valley (iii) Ancient link between Indus Valley and Mesopotamia (iii) Medieval trade links with Oman (Arabian Peninsula) and Surat (Gujarat). Though our study shows that commensal species such as rat can be used as a proxy to know our own past but can also be used as a model to understand the effect of human-induced environmental changes on the genome of their fellow companions

Blog by Dr Mumtaz Baig, Group Leader, LMCG, Amravati, on genetic conservation of Indian Wild Ass (Equus hemionus khur).D...
17/09/2017

Blog by Dr Mumtaz Baig, Group Leader, LMCG, Amravati, on genetic conservation of Indian Wild Ass (Equus hemionus khur).

Don’t be deceived by numbers in conservation: Lesson from Indian wild ass population genetics :

The Indian wild ass zoologically identified as Equus heminous khur belongs to the Asiatic stock of wild asses which were once roaming in continuous distribution from Arabian Peninsula to Manchuria. In all their distribution ranges in Asia, excessive hunting and ever shrinking habitat had pushed them to the endangered status. Currently, 4900 km2 Indian wild ass sanctuary carved out in little and Greater Rann of Kutch, Gujarat, India is the last refugia of these 4000 Indian wild ass population in southern Asia. Though hunting and poaching has not been reported for this wild Equid species and conservation efforts led to a significant increase in their number after the devastating protozoic disease surra wiped out most of the population and leaving just 350 surviving individuals in the year 1962. But measuring genetic diversity is of grave importance for conservation and management of wildlife. Using mitochondrial DNA and nuclear microsatellite markers, for the first time, we accessed the genetic diversity of free-ranging Indian wild asses to understand the underlying principles of population genetics operating in this isolated endangered wild population. Both mitochondrial and microsatellite analyses revealed low genetic diversity marked by single haplotype found in cytochrome b and D-loop region as well as average expected heterozygosity of 0.474 found by genotyping five microsatellite loci. Interestingly, the comparison of present and past demography using Bayesian markedly revealed steady decline in effective population size of Indian wild asses in Indian subcontinent after the origin of agriculture and rise of Indus valley in the west of the subcontinent. In recent years, the Indian wild asses have expanded their range as their presence is confirmed outside Rann of Kutch for example in Surendra Nagar district of Rajasthan. Even though their number is increasing, measures to enhance genetic diversity of this isolated population should be taken because the danger of attaining inbreeding depression and decrease in fitness is always associated with such population. Our study also demonstrates that the Indian wild ass is genetically identical to Turkmenistan Kulan and Persian Onager, hence efforts to import some breeding individuals from these region should be taken to initiate out breeding program to enhance their diversity. Successful re-introduction of Turkeminstan kulan in Israel where it is successfully hybridizing with existing Persian onager manifest our view.

Bos gaurus gaurus (The Indian wild gaur), one of the majestic wild bovid.
16/09/2017

Bos gaurus gaurus (The Indian wild gaur), one of the majestic wild bovid.

15/08/2017

Wishing you a happy Independence Day-2017
" Protect Wildlife, Save Biodiversity"

30/06/2017

One more research article entitled "Low genetic diversity of the endangered Indian wild ass Equus hemionus khur, as revealed by microsatellite analyses" came out from LMCG. The study is published in Journal of Genetics, Springer-Nature (Impact factor: 1). Current study deals with genotyping free-ranging endangered wild asses Equus hemionus khur inhabiting Little Rann of Kutch, Gujrat at five polymorphic microsatellites loci.Our study confirms low genetic diversity in the current extant bottlenecked Indian wild ass population. This is the first study that provide the foundation for genetic research require for last surviving population of Asiatic wild asses in southern Asia.

Get free access to this paper through this link:
http://rdcu.be/tMgd

Our Group Leader, Dr. Mumtaz Baig's new publication in collaboration with Indian Veterinary Research Institute (IVRI), B...
20/03/2017

Our Group Leader, Dr. Mumtaz Baig's new publication in collaboration with Indian Veterinary Research Institute (IVRI), Bareilly just comes out. The research deals with genome sequencing of the infectious Indian version of Peste des petits ruminants virus on diversity and phylogeography. The genome analyses provide much vital insight into the origin, epidemiology of Indian isolates (Izatnagar isolate).

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VMV Road, Kathora Naka
Amravati
444601

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